STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_4272Phospholipid/glycerol acyltransferase. (1284 aa)    
Predicted Functional Partners:
MYP_400
Non-ribosomal peptide synthetase module containing protein.
  
 0.984
MYP_3779
Hypothetical protein.
  
 0.981
MYP_4273
Carotenoid cis-trans isomerase.
 
 
 0.974
MYP_4271
Glycosyl transferase, family 2.
  
 0.952
MYP_4270
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ.
 
   
 0.912
MYP_4264
Hypothetical protein.
 
 0.911
MYP_398
Beta-ketoacyl synthase.
  
 0.902
MYP_3446
O-methyltransferase.
 
 
 0.899
MYP_4263
Hypothetical protein.
 
 0.887
MYP_4266
3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.887
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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