STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_4358Hypothetical protein CHU_3701. (207 aa)    
Predicted Functional Partners:
MYP_875
Hypothetical protein N824_28230.
  
     0.680
MYP_2619
Hypothetical protein.
  
     0.636
MYP_3848
Hypothetical protein.
  
     0.634
MYP_2050
Hypothetical protein.
  
     0.541
MYP_4711
Hypothetical protein Fluta_3350.
  
     0.541
MYP_4467
Hypothetical protein.
  
     0.539
MYP_2051
Metal dependent phosphohydrolase.
  
     0.507
MYP_846
Hypothetical protein CHU_3203.
  
     0.474
MYP_4468
Hypothetical protein.
  
     0.470
MYP_4465
Membrane protein.
  
     0.461
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.