STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_453Outer membrane protein. (695 aa)    
Predicted Functional Partners:
MYP_4846
WD-40-like repeat-containing protein.
  
  0.625
MYP_3145
Bifunctional cbb3-type cytochrome C oxidase subunit I/II; Belongs to the heme-copper respiratory oxidase family.
    
  0.617
MYP_1097
Hypothetical protein.
  
     0.610
MYP_67
Hypothetical protein.
  
 
   0.604
MYP_250
Hypothetical protein.
  
     0.597
MYP_3988
Membrane protein.
  
     0.596
MYP_3725
Cell envelope biogenesis protein OmpA.
  
 
 0.594
MYP_1657
Gliding motility-like protein.
  
     0.591
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.588
MYP_3687
Competence/damage-inducible protein CinA; Belongs to the CinA family.
    
  0.588
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.