Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MYP_1024 | MYP_1797 | Hypothetical protein. | Hypothetical protein CHU_3728. | 0.754 |
MYP_1024 | MYP_2453 | Hypothetical protein. | Hypothetical protein. | 0.764 |
MYP_1024 | MYP_3661 | Hypothetical protein. | Hypothetical protein. | 0.770 |
MYP_1024 | MYP_3737 | Hypothetical protein. | Hypothetical protein. | 0.773 |
MYP_1024 | MYP_4130 | Hypothetical protein. | Gas vesicle protein. | 0.767 |
MYP_1024 | MYP_4423 | Hypothetical protein. | Hypothetical protein. | 0.773 |
MYP_1024 | MYP_4533 | Hypothetical protein. | Hypothetical protein. | 0.773 |
MYP_1024 | MYP_4806 | Hypothetical protein. | Hypothetical protein CHU_3303. | 0.739 |
MYP_1024 | MYP_4912 | Hypothetical protein. | Hypothetical protein. | 0.623 |
MYP_1024 | MYP_526 | Hypothetical protein. | Hypothetical protein. | 0.774 |
MYP_1797 | MYP_1024 | Hypothetical protein CHU_3728. | Hypothetical protein. | 0.754 |
MYP_1797 | MYP_2453 | Hypothetical protein CHU_3728. | Hypothetical protein. | 0.677 |
MYP_1797 | MYP_3661 | Hypothetical protein CHU_3728. | Hypothetical protein. | 0.774 |
MYP_1797 | MYP_3737 | Hypothetical protein CHU_3728. | Hypothetical protein. | 0.770 |
MYP_1797 | MYP_4130 | Hypothetical protein CHU_3728. | Gas vesicle protein. | 0.719 |
MYP_1797 | MYP_4423 | Hypothetical protein CHU_3728. | Hypothetical protein. | 0.763 |
MYP_1797 | MYP_4533 | Hypothetical protein CHU_3728. | Hypothetical protein. | 0.774 |
MYP_1797 | MYP_4806 | Hypothetical protein CHU_3728. | Hypothetical protein CHU_3303. | 0.769 |
MYP_1797 | MYP_4912 | Hypothetical protein CHU_3728. | Hypothetical protein. | 0.663 |
MYP_1797 | MYP_526 | Hypothetical protein CHU_3728. | Hypothetical protein. | 0.770 |
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