Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MYP_1052 | MYP_1973 | Glycoside hydrolase. | Hypothetical protein. | 0.426 |
MYP_1052 | MYP_3219 | Glycoside hydrolase. | Hypothetical protein. | 0.442 |
MYP_1052 | MYP_3220 | Glycoside hydrolase. | Hypothetical protein. | 0.425 |
MYP_1052 | MYP_3276 | Glycoside hydrolase. | Hypothetical protein Mhun_0418, partial. | 0.437 |
MYP_1052 | MYP_3688 | Glycoside hydrolase. | Hypothetical protein. | 0.526 |
MYP_1052 | MYP_4391 | Glycoside hydrolase. | Hypothetical protein Dtur_1285. | 0.436 |
MYP_1052 | MYP_4588 | Glycoside hydrolase. | PKD domain-containing protein. | 0.600 |
MYP_1601 | MYP_1973 | Peptidase S8/S53 subtilisin kexin sedolisin. | Hypothetical protein. | 0.582 |
MYP_1601 | MYP_3219 | Peptidase S8/S53 subtilisin kexin sedolisin. | Hypothetical protein. | 0.529 |
MYP_1601 | MYP_3220 | Peptidase S8/S53 subtilisin kexin sedolisin. | Hypothetical protein. | 0.582 |
MYP_1601 | MYP_3276 | Peptidase S8/S53 subtilisin kexin sedolisin. | Hypothetical protein Mhun_0418, partial. | 0.529 |
MYP_1601 | MYP_3688 | Peptidase S8/S53 subtilisin kexin sedolisin. | Hypothetical protein. | 0.661 |
MYP_1601 | MYP_3857 | Peptidase S8/S53 subtilisin kexin sedolisin. | Fibronectin type III domain-containing protein. | 0.529 |
MYP_1601 | MYP_4306 | Peptidase S8/S53 subtilisin kexin sedolisin. | Lipoprotein, putative. | 0.529 |
MYP_1601 | MYP_4391 | Peptidase S8/S53 subtilisin kexin sedolisin. | Hypothetical protein Dtur_1285. | 0.529 |
MYP_1601 | MYP_4588 | Peptidase S8/S53 subtilisin kexin sedolisin. | PKD domain-containing protein. | 0.609 |
MYP_1973 | MYP_1052 | Hypothetical protein. | Glycoside hydrolase. | 0.426 |
MYP_1973 | MYP_1601 | Hypothetical protein. | Peptidase S8/S53 subtilisin kexin sedolisin. | 0.582 |
MYP_1973 | MYP_3688 | Hypothetical protein. | Hypothetical protein. | 0.494 |
MYP_1973 | MYP_4588 | Hypothetical protein. | PKD domain-containing protein. | 0.752 |
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