STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_4705Cadherin domain-containing protein; Putative calcium-binding protein. (755 aa)    
Predicted Functional Partners:
MYP_4736
Hypothetical protein CHU_2196.
   
   0.727
MYP_3687
Competence/damage-inducible protein CinA; Belongs to the CinA family.
     
 0.683
MYP_4706
cAMP-binding protein.
       0.671
MYP_3421
Phytase.
     
 0.620
MYP_1504
Hypothetical protein CHU_0791.
  
 
  0.588
MYP_4605
Alpha beta-propellor repeat-containing integrin.
  
 
  0.578
MYP_3110
Hypothetical protein CHU_0903.
  
     0.567
MYP_4707
Hypothetical protein.
       0.566
MYP_1152
Hypothetical protein CHU_0768.
 
 
  0.565
MYP_2776
Hypothetical protein.
    
  0.561
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.