Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MYP_1257 | MYP_3702 | MYP_1257 | MYP_3702 | Hypothetical protein; Belongs to the ALAD family. | uroporphyrin-III C-methyltransferase. | 0.952 |
MYP_1257 | MYP_3703 | MYP_1257 | MYP_3703 | Hypothetical protein; Belongs to the ALAD family. | Precorrin-2 dehydrogenase. | 0.851 |
MYP_1257 | MYP_3741 | MYP_1257 | MYP_3741 | Hypothetical protein; Belongs to the ALAD family. | Nonribosomal peptide synthetase. | 0.826 |
MYP_1257 | MYP_3779 | MYP_1257 | MYP_3779 | Hypothetical protein; Belongs to the ALAD family. | Hypothetical protein. | 0.785 |
MYP_1257 | MYP_398 | MYP_1257 | MYP_398 | Hypothetical protein; Belongs to the ALAD family. | Beta-ketoacyl synthase. | 0.786 |
MYP_1257 | MYP_400 | MYP_1257 | MYP_400 | Hypothetical protein; Belongs to the ALAD family. | Non-ribosomal peptide synthetase module containing protein. | 0.904 |
MYP_1257 | hemA | MYP_1257 | MYP_4784 | Hypothetical protein; Belongs to the ALAD family. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.856 |
MYP_1257 | hemC | MYP_1257 | MYP_1066 | Hypothetical protein; Belongs to the ALAD family. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.998 |
MYP_1257 | hemL | MYP_1257 | MYP_2319 | Hypothetical protein; Belongs to the ALAD family. | Glutamate-1-semialdehyde aminotransferase. | 0.994 |
MYP_3702 | MYP_1257 | MYP_3702 | MYP_1257 | uroporphyrin-III C-methyltransferase. | Hypothetical protein; Belongs to the ALAD family. | 0.952 |
MYP_3702 | MYP_3703 | MYP_3702 | MYP_3703 | uroporphyrin-III C-methyltransferase. | Precorrin-2 dehydrogenase. | 0.999 |
MYP_3702 | hemA | MYP_3702 | MYP_4784 | uroporphyrin-III C-methyltransferase. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.774 |
MYP_3702 | hemC | MYP_3702 | MYP_1066 | uroporphyrin-III C-methyltransferase. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.996 |
MYP_3702 | hemL | MYP_3702 | MYP_2319 | uroporphyrin-III C-methyltransferase. | Glutamate-1-semialdehyde aminotransferase. | 0.828 |
MYP_3703 | MYP_1257 | MYP_3703 | MYP_1257 | Precorrin-2 dehydrogenase. | Hypothetical protein; Belongs to the ALAD family. | 0.851 |
MYP_3703 | MYP_3702 | MYP_3703 | MYP_3702 | Precorrin-2 dehydrogenase. | uroporphyrin-III C-methyltransferase. | 0.999 |
MYP_3703 | gltX | MYP_3703 | MYP_2036 | Precorrin-2 dehydrogenase. | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.548 |
MYP_3703 | hemA | MYP_3703 | MYP_4784 | Precorrin-2 dehydrogenase. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.778 |
MYP_3703 | hemC | MYP_3703 | MYP_1066 | Precorrin-2 dehydrogenase. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.952 |
MYP_3703 | hemL | MYP_3703 | MYP_2319 | Precorrin-2 dehydrogenase. | Glutamate-1-semialdehyde aminotransferase. | 0.865 |
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