STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_490Hypothetical protein. (391 aa)    
Predicted Functional Partners:
MYP_4685
Hypothetical protein.
   
 0.646
MYP_219
Hydrolase.
    
   0.597
MYP_2116
Transcriptional antiterminator.
  
 0.542
MYP_3131
Hypothetical protein.
  
 0.542
MYP_3690
Hypothetical protein.
  
 0.542
MYP_3741
Nonribosomal peptide synthetase.
    
 0.517
MYP_400
Non-ribosomal peptide synthetase module containing protein.
    
 
 0.476
MYP_398
Beta-ketoacyl synthase.
   
 
 0.457
MYP_3779
Hypothetical protein.
  
 0.453
MYP_121
Metallophosphoesterase.
    
  0.451
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.