STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_494Hypothetical protein. (480 aa)    
Predicted Functional Partners:
MYP_495
Pseudaminic acid synthase.
 
 
 0.980
MYP_493
Hypothetical protein.
  
 0.965
MYP_492
UDP-N-acetylglucosamine 4,6-dehydratase.
 
   
 0.883
MYP_491
Pyridoxal-5'-phosphate-dependent protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.806
MYP_496
Hypothetical protein.
       0.530
MYP_497
FkbM family methyltransferase.
       0.513
MYP_1538
Hypothetical protein.
  
 
 0.510
MYP_2086
IucA/IucC family protein.
  
 
 0.510
MYP_4971
Hypothetical protein.
  
 
 0.510
MYP_498
Hypothetical protein.
       0.496
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.