STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_496Hypothetical protein. (302 aa)    
Predicted Functional Partners:
MYP_400
Non-ribosomal peptide synthetase module containing protein.
  
 0.963
MYP_398
Beta-ketoacyl synthase.
   
 0.945
MYP_3741
Nonribosomal peptide synthetase.
   
 0.935
MYP_3779
Hypothetical protein.
  
 
 0.819
MYP_1257
Hypothetical protein; Belongs to the ALAD family.
  
 
 0.818
MYP_495
Pseudaminic acid synthase.
       0.793
MYP_497
FkbM family methyltransferase.
       0.775
MYP_498
Hypothetical protein.
       0.773
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
  
 0.719
MYP_493
Hypothetical protein.
    
  0.684
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.