STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_4967Glycoside hydrolase. (827 aa)    
Predicted Functional Partners:
MYP_2166
Multifunctional acetylxylan esterase/b-xylosidase/a-L-arabinofuranosidase and carbohydrate esterase family 6 protein.
  
  
  0.834
MYP_4347
Glycoside hydrolase.
  
  
 0.819
MYP_4968
Endoglucanase.
 
  
  0.809
MYP_4610
Hypothetical protein; Belongs to the glycosyl hydrolase 26 family.
  
  
 0.785
MYP_2112
Bifunctional xylanase/esterase.
  
  
 0.775
MYP_458
Endoglucanase.
  
  
  0.771
MYP_3614
Bifunctional xylanase/esterase.
  
  
 0.743
MYP_2666
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.714
MYP_3567
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.707
MYP_1436
Hypothetical protein.
  
  
  0.706
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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