Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MYP_1845 | MYP_5014 | Hypothetical protein. | Rhs repeat-associated core domain protein, partial. | 0.468 |
MYP_1847 | MYP_5014 | Hypothetical protein. | Rhs repeat-associated core domain protein, partial. | 0.460 |
MYP_246 | MYP_5014 | Hypothetical protein. | Rhs repeat-associated core domain protein, partial. | 0.417 |
MYP_2817 | MYP_3624 | CARDB domain-containing protein. | Hypothetical protein CHU_1521. | 0.453 |
MYP_2817 | MYP_5014 | CARDB domain-containing protein. | Rhs repeat-associated core domain protein, partial. | 0.467 |
MYP_2868 | MYP_5014 | Hypothetical protein. | Rhs repeat-associated core domain protein, partial. | 0.501 |
MYP_2996 | MYP_5014 | Hypothetical protein. | Rhs repeat-associated core domain protein, partial. | 0.540 |
MYP_3624 | MYP_2817 | Hypothetical protein CHU_1521. | CARDB domain-containing protein. | 0.453 |
MYP_3624 | MYP_5014 | Hypothetical protein CHU_1521. | Rhs repeat-associated core domain protein, partial. | 0.442 |
MYP_4846 | MYP_5014 | WD-40-like repeat-containing protein. | Rhs repeat-associated core domain protein, partial. | 0.430 |
MYP_5014 | MYP_1845 | Rhs repeat-associated core domain protein, partial. | Hypothetical protein. | 0.468 |
MYP_5014 | MYP_1847 | Rhs repeat-associated core domain protein, partial. | Hypothetical protein. | 0.460 |
MYP_5014 | MYP_246 | Rhs repeat-associated core domain protein, partial. | Hypothetical protein. | 0.417 |
MYP_5014 | MYP_2817 | Rhs repeat-associated core domain protein, partial. | CARDB domain-containing protein. | 0.467 |
MYP_5014 | MYP_2868 | Rhs repeat-associated core domain protein, partial. | Hypothetical protein. | 0.501 |
MYP_5014 | MYP_2996 | Rhs repeat-associated core domain protein, partial. | Hypothetical protein. | 0.540 |
MYP_5014 | MYP_3624 | Rhs repeat-associated core domain protein, partial. | Hypothetical protein CHU_1521. | 0.442 |
MYP_5014 | MYP_4846 | Rhs repeat-associated core domain protein, partial. | WD-40-like repeat-containing protein. | 0.430 |
MYP_5014 | MYP_5015 | Rhs repeat-associated core domain protein, partial. | Hypothetical protein. | 0.773 |
MYP_5014 | MYP_5046 | Rhs repeat-associated core domain protein, partial. | Hypothetical protein. | 0.537 |
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