STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_520Hypothetical protein. (147 aa)    
Predicted Functional Partners:
MYP_519
Exonuclease V subunit alpha.
       0.789
MYP_240
Hypothetical protein CHU_2718.
  
     0.662
MYP_517
NUDIX hydrolase.
       0.577
MYP_518
NUDIX hydrolase.
       0.577
MYP_2206
Hypothetical protein.
  
     0.514
MYP_2208
Hypothetical protein CHU_1553.
  
     0.505
MYP_933
uroporphyrinogen-III synthase.
  
     0.461
MYP_2336
Hypothetical protein.
  
     0.455
MYP_4190
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.444
MYP_4463
Cytochrome b5.
  
     0.442
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.