STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_700Hypothetical protein; Belongs to the 'phage' integrase family. (416 aa)    
Predicted Functional Partners:
MYP_4393
Alginate O-acetyltransferase AlgJ.
  
     0.609
MYP_3458
Hypothetical protein.
  
     0.582
MYP_3457
Hypothetical protein.
  
     0.547
MYP_701
Hypothetical protein zobellia_3362.
       0.529
MYP_1543
Hypothetical protein Solca_2403.
  
     0.458
MYP_341
Hypothetical protein.
  
     0.456
MYP_2486
Kelch repeat-containing protein.
  
     0.448
MYP_1540
Hypothetical protein Solca_2407.
  
     0.434
MYP_2485
Kelch repeat-containing protein.
  
     0.428
MYP_472
Hypothetical protein Slin_3024.
  
     0.417
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.