STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_763NTE family protein rssA. (258 aa)    
Predicted Functional Partners:
MYP_762
Beta-lactamase.
   
   0.821
MYP_3779
Hypothetical protein.
    
 0.761
MYP_400
Non-ribosomal peptide synthetase module containing protein.
    
 0.648
MYP_2742
Hypothetical protein Phep_2500.
  
  
 0.595
accA
acetyl-CoA carboxylase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
       0.542
MYP_3713
PGAP1 family protein.
     
 0.536
MYP_1580
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein.
    
 0.506
MYP_1670
long-chain-fatty-acid--CoA ligase.
    
 0.493
MYP_3741
Nonribosomal peptide synthetase.
    
  0.483
MYP_3707
Hypothetical protein.
    
  0.481
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.