STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_770Hypothetical protein Slin_1995. (300 aa)    
Predicted Functional Partners:
MYP_4140
Hypothetical protein.
  
 
 0.984
MYP_768
Integral outer membrane protein.
 
 
 0.913
MYP_767
Hypothetical protein.
 
     0.877
MYP_535
Hypothetical protein Slin_2018.
  
 
   0.853
MYP_771
Tetrahydrofolate synthase; Belongs to the folylpolyglutamate synthase family.
       0.793
MYP_4005
Biopolymer transport protein ExbD/TolR.
 
 
 0.791
MYP_4533
Hypothetical protein.
  
     0.743
trmB
Hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
    0.734
MYP_4006
Biopolymer transporter ExbB.
  
 
 0.713
MYP_4033
Hypothetical protein Hsw_0356.
   
 
 0.704
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.