STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_778Hypothetical protein. (242 aa)    
Predicted Functional Partners:
MYP_779
Peptidase S8 and S53 subtilisin kexin sedolisin.
 
     0.832
mnmA
Thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.793
MYP_3490
Hypothetical protein.
  
     0.773
MYP_4073
Hypothetical protein.
  
     0.761
MYP_4348
Glycerol kinase.
  
     0.761
MYP_3713
PGAP1 family protein.
  
     0.709
MYP_1710
FG-GAP repeat-containing protein.
  
     0.692
MYP_270
Hypothetical protein.
  
     0.673
MYP_2369
Hypothetical protein.
  
     0.672
MYP_3801
Hypothetical protein.
  
     0.664
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.