STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_879Hypothetical protein. (150 aa)    
Predicted Functional Partners:
MYP_878
Histidine kinase.
 
     0.870
MYP_877
Winged helix family two component transcriptional regulator.
 
     0.808
MYP_3785
Putative uncharacterized protein.
  
     0.691
MYP_1525
Hypothetical protein.
  
     0.673
MYP_4231
Twp-component sensor histidine kinase.
 
     0.637
MYP_4318
Hypothetical protein.
  
     0.512
MYP_2594
Hypothetical protein.
 
     0.497
MYP_4484
DoxX family protein.
  
     0.492
MYP_880
Phosphoglycerate mutase family protein.
       0.483
MYP_993
Response regulator of ato.
  
 
   0.483
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.