STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_911Hypothetical protein. (301 aa)    
Predicted Functional Partners:
MYP_2537
Hypothetical protein CHU_1334.
     0.916
MYP_2420
Outer membrane lipoprotein,lipocalin family; Belongs to the calycin superfamily. Lipocalin family.
      0.895
MYP_4012
Outer membrane lipoprotein; Belongs to the calycin superfamily. Lipocalin family.
      0.791
MYP_3671
Pyridoxamine 5'-phosphate oxidase.
   
    0.703
MYP_4413
Arginine deiminase.
   
    0.630
MYP_2935
Nucleoside-diphosphate sugar epimerase.
 
    0.564
MYP_910
DNA repair ATPase.
       0.543
MYP_2928
Hypothetical protein.
   
    0.524
MYP_2717
CsbD family protein; Belongs to the UPF0337 (CsbD) family.
   
    0.502
MYP_912
Hypothetical protein; Belongs to the LOG family.
       0.499
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.