Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MYP_1659 | MYP_2129 | MYP_1659 | MYP_2129 | Hypothetical protein. | Hypothetical protein. | 0.774 |
MYP_1659 | MYP_2315 | MYP_1659 | MYP_2315 | Hypothetical protein. | GldC protein. | 0.755 |
MYP_1659 | MYP_5001 | MYP_1659 | MYP_5001 | Hypothetical protein. | acyl-CoA reductase. | 0.753 |
MYP_1659 | MYP_954 | MYP_1659 | MYP_954 | Hypothetical protein. | Hypothetical protein MED152_05055. | 0.739 |
MYP_1659 | MYP_956 | MYP_1659 | MYP_956 | Hypothetical protein. | Oxidoreductase. | 0.419 |
MYP_1659 | bshC | MYP_1659 | MYP_1265 | Hypothetical protein. | UPF0747 protein; Belongs to the BshC family. | 0.501 |
MYP_2129 | MYP_1659 | MYP_2129 | MYP_1659 | Hypothetical protein. | Hypothetical protein. | 0.774 |
MYP_2129 | MYP_218 | MYP_2129 | MYP_218 | Hypothetical protein. | Hypothetical protein. | 0.434 |
MYP_2129 | MYP_2315 | MYP_2129 | MYP_2315 | Hypothetical protein. | GldC protein. | 0.766 |
MYP_2129 | MYP_2643 | MYP_2129 | MYP_2643 | Hypothetical protein. | Hypothetical protein CHU_1776. | 0.458 |
MYP_2129 | MYP_5001 | MYP_2129 | MYP_5001 | Hypothetical protein. | acyl-CoA reductase. | 0.684 |
MYP_2129 | MYP_954 | MYP_2129 | MYP_954 | Hypothetical protein. | Hypothetical protein MED152_05055. | 0.767 |
MYP_2129 | bshC | MYP_2129 | MYP_1265 | Hypothetical protein. | UPF0747 protein; Belongs to the BshC family. | 0.675 |
MYP_218 | MYP_2129 | MYP_218 | MYP_2129 | Hypothetical protein. | Hypothetical protein. | 0.434 |
MYP_218 | MYP_2315 | MYP_218 | MYP_2315 | Hypothetical protein. | GldC protein. | 0.439 |
MYP_218 | MYP_954 | MYP_218 | MYP_954 | Hypothetical protein. | Hypothetical protein MED152_05055. | 0.556 |
MYP_2278 | MYP_2643 | MYP_2278 | MYP_2643 | Hypothetical protein Dfer_5785; Belongs to the UPF0403 family. | Hypothetical protein CHU_1776. | 0.715 |
MYP_2278 | MYP_954 | MYP_2278 | MYP_954 | Hypothetical protein Dfer_5785; Belongs to the UPF0403 family. | Hypothetical protein MED152_05055. | 0.537 |
MYP_2278 | bshC | MYP_2278 | MYP_1265 | Hypothetical protein Dfer_5785; Belongs to the UPF0403 family. | UPF0747 protein; Belongs to the BshC family. | 0.793 |
MYP_2315 | MYP_1659 | MYP_2315 | MYP_1659 | GldC protein. | Hypothetical protein. | 0.755 |
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