STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR98034.1Transglutaminase-like superfamily protein. (717 aa)    
Predicted Functional Partners:
SFR98041.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
    0.950
SFR98056.1
Fibronectin type III domain-containing protein.
 
     0.946
SFR98065.1
Serine/threonine protein kinase.
 
     0.851
SFS03314.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
    0.833
SFS03332.1
Fibronectin type III domain-containing protein.
 
     0.797
SFR98073.1
Protein phosphatase.
       0.774
SFR98049.1
MoxR-like ATPase.
       0.771
SFS03275.1
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr.
 
     0.759
SFR98080.1
Protein of unknown function.
       0.746
SFS03295.1
Uncharacterized membrane protein YckC, RDD family.
 
     0.688
Your Current Organism:
Agrococcus baldri
NCBI taxonomy Id: 153730
Other names: A. baldri, Agrococcus baldri Zlamala et al. 2002 emend. Nouioui et al. 2018, CCM 4953, DSM 14215, IAM 15147, JCM 12132, NBRC 103055, strain V-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.