Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS00210.1 | SFS01879.1 | SAMN04487783_0429 | SAMN04487783_0599 | Predicted trehalose synthase. | Alpha-amylase. | 0.965 |
SFS00210.1 | SFS07262.1 | SAMN04487783_0429 | SAMN04487783_0935 | Predicted trehalose synthase. | Alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family. | 0.971 |
SFS00210.1 | SFS07303.1 | SAMN04487783_0429 | SAMN04487783_0941 | Predicted trehalose synthase. | Alpha-glucosidase. | 0.996 |
SFS00210.1 | SFS07883.1 | SAMN04487783_0429 | SAMN04487783_1022 | Predicted trehalose synthase. | Phosphoglucomutase. | 0.906 |
SFS00210.1 | SFS14157.1 | SAMN04487783_0429 | SAMN04487783_1780 | Predicted trehalose synthase. | UTP--glucose-1-phosphate uridylyltransferase. | 0.527 |
SFS00210.1 | SFS16084.1 | SAMN04487783_0429 | SAMN04487783_2206 | Predicted trehalose synthase. | Starch phosphorylase. | 0.994 |
SFS00210.1 | SFS18138.1 | SAMN04487783_0429 | SAMN04487783_2542 | Predicted trehalose synthase. | Glycosidase. | 0.978 |
SFS00210.1 | glgC | SAMN04487783_0429 | SAMN04487783_2610 | Predicted trehalose synthase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.984 |
SFS01879.1 | SFS00210.1 | SAMN04487783_0599 | SAMN04487783_0429 | Alpha-amylase. | Predicted trehalose synthase. | 0.965 |
SFS01879.1 | SFS07303.1 | SAMN04487783_0599 | SAMN04487783_0941 | Alpha-amylase. | Alpha-glucosidase. | 0.898 |
SFS01879.1 | SFS16084.1 | SAMN04487783_0599 | SAMN04487783_2206 | Alpha-amylase. | Starch phosphorylase. | 0.870 |
SFS07262.1 | SFS00210.1 | SAMN04487783_0935 | SAMN04487783_0429 | Alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family. | Predicted trehalose synthase. | 0.971 |
SFS07262.1 | SFS07303.1 | SAMN04487783_0935 | SAMN04487783_0941 | Alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family. | Alpha-glucosidase. | 0.830 |
SFS07262.1 | SFS16084.1 | SAMN04487783_0935 | SAMN04487783_2206 | Alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family. | Starch phosphorylase. | 0.814 |
SFS07262.1 | SFS18138.1 | SAMN04487783_0935 | SAMN04487783_2542 | Alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family. | Glycosidase. | 0.740 |
SFS07262.1 | bglB | SAMN04487783_0935 | SAMN04487783_2404 | Alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family. | Beta-glucosidase. | 0.641 |
SFS07262.1 | glgC | SAMN04487783_0935 | SAMN04487783_2610 | Alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.454 |
SFS07303.1 | SFS00210.1 | SAMN04487783_0941 | SAMN04487783_0429 | Alpha-glucosidase. | Predicted trehalose synthase. | 0.996 |
SFS07303.1 | SFS01879.1 | SAMN04487783_0941 | SAMN04487783_0599 | Alpha-glucosidase. | Alpha-amylase. | 0.898 |
SFS07303.1 | SFS07262.1 | SAMN04487783_0941 | SAMN04487783_0935 | Alpha-glucosidase. | Alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family. | 0.830 |
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