Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS00027.1 | SFS07652.1 | SAMN04487783_0411 | SAMN04487783_0988 | Mannose-6-phosphate isomerase, type 1. | Cation diffusion facilitator family transporter. | 0.456 |
SFS03868.1 | SFS07652.1 | SAMN04487783_0796 | SAMN04487783_0988 | Dihydroneopterin aldolase. | Cation diffusion facilitator family transporter. | 0.642 |
SFS07652.1 | SFS00027.1 | SAMN04487783_0988 | SAMN04487783_0411 | Cation diffusion facilitator family transporter. | Mannose-6-phosphate isomerase, type 1. | 0.456 |
SFS07652.1 | SFS03868.1 | SAMN04487783_0988 | SAMN04487783_0796 | Cation diffusion facilitator family transporter. | Dihydroneopterin aldolase. | 0.642 |
SFS07652.1 | SFS07659.1 | SAMN04487783_0988 | SAMN04487783_0989 | Cation diffusion facilitator family transporter. | Hypothetical protein. | 0.688 |
SFS07652.1 | SFS07667.1 | SAMN04487783_0988 | SAMN04487783_0990 | Cation diffusion facilitator family transporter. | Hypothetical protein. | 0.655 |
SFS07652.1 | SFS14119.1 | SAMN04487783_0988 | SAMN04487783_1772 | Cation diffusion facilitator family transporter. | Mannose-6-phosphate isomerase, type 1. | 0.464 |
SFS07652.1 | mdh | SAMN04487783_0988 | SAMN04487783_1939 | Cation diffusion facilitator family transporter. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.565 |
SFS07652.1 | proC | SAMN04487783_0988 | SAMN04487783_0987 | Cation diffusion facilitator family transporter. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.620 |
SFS07659.1 | SFS07652.1 | SAMN04487783_0989 | SAMN04487783_0988 | Hypothetical protein. | Cation diffusion facilitator family transporter. | 0.688 |
SFS07659.1 | SFS07667.1 | SAMN04487783_0989 | SAMN04487783_0990 | Hypothetical protein. | Hypothetical protein. | 0.763 |
SFS07659.1 | proC | SAMN04487783_0989 | SAMN04487783_0987 | Hypothetical protein. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.488 |
SFS07667.1 | SFS07652.1 | SAMN04487783_0990 | SAMN04487783_0988 | Hypothetical protein. | Cation diffusion facilitator family transporter. | 0.655 |
SFS07667.1 | SFS07659.1 | SAMN04487783_0990 | SAMN04487783_0989 | Hypothetical protein. | Hypothetical protein. | 0.763 |
SFS07667.1 | proC | SAMN04487783_0990 | SAMN04487783_0987 | Hypothetical protein. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.479 |
SFS14119.1 | SFS07652.1 | SAMN04487783_1772 | SAMN04487783_0988 | Mannose-6-phosphate isomerase, type 1. | Cation diffusion facilitator family transporter. | 0.464 |
mdh | SFS07652.1 | SAMN04487783_1939 | SAMN04487783_0988 | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | Cation diffusion facilitator family transporter. | 0.565 |
proC | SFS07652.1 | SAMN04487783_0987 | SAMN04487783_0988 | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | Cation diffusion facilitator family transporter. | 0.620 |
proC | SFS07659.1 | SAMN04487783_0987 | SAMN04487783_0989 | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | Hypothetical protein. | 0.488 |
proC | SFS07667.1 | SAMN04487783_0987 | SAMN04487783_0990 | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | Hypothetical protein. | 0.479 |