STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS08964.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
SFS08958.1
ABC-2 type transport system ATP-binding protein.
 
     0.938
SFS08952.1
DNA-binding transcriptional regulator YhcF, GntR family.
 
     0.905
SFS11711.1
Hypothetical protein.
  
     0.664
SFS17937.1
Hypothetical protein.
  
     0.652
SFS18488.1
GGDEF domain-containing protein, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants.
  
     0.639
SFS01227.1
Protein-disulfide isomerase.
  
     0.597
SFS03343.1
Hypothetical protein.
  
     0.574
SFS01932.1
Hypothetical protein.
  
     0.563
SFS08196.1
Protein of unknown function.
  
     0.546
SFS10537.1
Hypothetical protein.
  
     0.542
Your Current Organism:
Agrococcus baldri
NCBI taxonomy Id: 153730
Other names: A. baldri, Agrococcus baldri Zlamala et al. 2002 emend. Nouioui et al. 2018, CCM 4953, DSM 14215, IAM 15147, JCM 12132, NBRC 103055, strain V-108
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.