STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS09078.1Transcriptional regulator, IclR family. (247 aa)    
Predicted Functional Partners:
SFS18455.1
Sensor histidine kinase inhibitor, KipI family.
  
    0.933
SFS09084.1
2-dehydro-3-deoxygluconokinase.
 
     0.899
SFS09071.1
2-keto-3-deoxy-phosphogluconate aldolase.
 
     0.872
SFS09103.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.863
SFS09091.1
Putative tricarboxylic transport membrane protein.
 
     0.862
SFS09059.1
Uncharacterized protein, UPF0303 family.
       0.773
SFS09065.1
L-glyceraldehyde 3-phosphate reductase.
       0.773
SFS09096.1
Tripartite tricarboxylate transporter TctB family protein.
       0.773
SFS14234.1
Transcriptional regulator, IclR family.
  
     0.769
SFS11302.1
2-dehydro-3-deoxygluconokinase.
 
     0.544
Your Current Organism:
Agrococcus baldri
NCBI taxonomy Id: 153730
Other names: A. baldri, Agrococcus baldri Zlamala et al. 2002 emend. Nouioui et al. 2018, CCM 4953, DSM 14215, IAM 15147, JCM 12132, NBRC 103055, strain V-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.