node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS06472.1 | SFS06636.1 | SAMN04487783_0833 | SAMN04487783_0855 | DNA polymerase III, delta prime subunit. | DNA polymerase-3 subunit gamma/tau. | 0.999 |
SFS06472.1 | SFS09207.1 | SAMN04487783_0833 | SAMN04487783_1225 | DNA polymerase III, delta prime subunit. | MerR family transcriptional regulator, heat shock protein HspR. | 0.686 |
SFS06472.1 | SFS10440.1 | SAMN04487783_0833 | SAMN04487783_1410 | DNA polymerase III, delta prime subunit. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.999 |
SFS06636.1 | SFS06472.1 | SAMN04487783_0855 | SAMN04487783_0833 | DNA polymerase-3 subunit gamma/tau. | DNA polymerase III, delta prime subunit. | 0.999 |
SFS06636.1 | SFS09207.1 | SAMN04487783_0855 | SAMN04487783_1225 | DNA polymerase-3 subunit gamma/tau. | MerR family transcriptional regulator, heat shock protein HspR. | 0.791 |
SFS06636.1 | SFS10440.1 | SAMN04487783_0855 | SAMN04487783_1410 | DNA polymerase-3 subunit gamma/tau. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.999 |
SFS06636.1 | sigA | SAMN04487783_0855 | SAMN04487783_2788 | DNA polymerase-3 subunit gamma/tau. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.408 |
SFS09207.1 | SFS06472.1 | SAMN04487783_1225 | SAMN04487783_0833 | MerR family transcriptional regulator, heat shock protein HspR. | DNA polymerase III, delta prime subunit. | 0.686 |
SFS09207.1 | SFS06636.1 | SAMN04487783_1225 | SAMN04487783_0855 | MerR family transcriptional regulator, heat shock protein HspR. | DNA polymerase-3 subunit gamma/tau. | 0.791 |
SFS09207.1 | SFS09214.1 | SAMN04487783_1225 | SAMN04487783_1226 | MerR family transcriptional regulator, heat shock protein HspR. | Molecular chaperone DnaJ. | 0.976 |
SFS09207.1 | SFS10440.1 | SAMN04487783_1225 | SAMN04487783_1410 | MerR family transcriptional regulator, heat shock protein HspR. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.719 |
SFS09207.1 | dnaJ2 | SAMN04487783_1225 | SAMN04487783_2331 | MerR family transcriptional regulator, heat shock protein HspR. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.871 |
SFS09207.1 | dnaK | SAMN04487783_1225 | SAMN04487783_1228 | MerR family transcriptional regulator, heat shock protein HspR. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.944 |
SFS09207.1 | grpE | SAMN04487783_1225 | SAMN04487783_1227 | MerR family transcriptional regulator, heat shock protein HspR. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.976 |
SFS09207.1 | hrcA | SAMN04487783_1225 | SAMN04487783_2330 | MerR family transcriptional regulator, heat shock protein HspR. | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.716 |
SFS09207.1 | rpoB | SAMN04487783_1225 | SAMN04487783_0740 | MerR family transcriptional regulator, heat shock protein HspR. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.696 |
SFS09207.1 | sigA | SAMN04487783_1225 | SAMN04487783_2788 | MerR family transcriptional regulator, heat shock protein HspR. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.762 |
SFS09214.1 | SFS09207.1 | SAMN04487783_1226 | SAMN04487783_1225 | Molecular chaperone DnaJ. | MerR family transcriptional regulator, heat shock protein HspR. | 0.976 |
SFS09214.1 | dnaK | SAMN04487783_1226 | SAMN04487783_1228 | Molecular chaperone DnaJ. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.999 |
SFS09214.1 | grpE | SAMN04487783_1226 | SAMN04487783_1227 | Molecular chaperone DnaJ. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.992 |