STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS15885.1Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. (274 aa)    
Predicted Functional Partners:
SFS00512.1
Cysteine desulfurase family protein, VC1184 subfamily.
    
   0.817
SFS02198.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.817
SFS00210.1
Predicted trehalose synthase.
    
  0.780
SFS15882.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
       0.552
SFS07335.1
Cardiolipin synthetase 2.
  
 
  0.534
Your Current Organism:
Agrococcus baldri
NCBI taxonomy Id: 153730
Other names: A. baldri, Agrococcus baldri Zlamala et al. 2002 emend. Nouioui et al. 2018, CCM 4953, DSM 14215, IAM 15147, JCM 12132, NBRC 103055, strain V-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.