Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS10747.1 | SFS10753.1 | SAMN04487783_1455 | SAMN04487783_1456 | Pyruvate dehydrogenase E1 component alpha subunit. | Pyruvate dehydrogenase E1 component beta subunit. | 0.999 |
SFS10747.1 | SFS13923.1 | SAMN04487783_1455 | SAMN04487783_1729 | Pyruvate dehydrogenase E1 component alpha subunit. | Dihydrolipoamide dehydrogenase. | 0.908 |
SFS10747.1 | SFS17957.1 | SAMN04487783_1455 | SAMN04487783_2460 | Pyruvate dehydrogenase E1 component alpha subunit. | Pyruvate dehydrogenase E1 component beta subunit. | 0.999 |
SFS10747.1 | SFS18187.1 | SAMN04487783_1455 | SAMN04487783_2561 | Pyruvate dehydrogenase E1 component alpha subunit. | Mercuric reductase. | 0.908 |
SFS10747.1 | SFS18998.1 | SAMN04487783_1455 | SAMN04487783_2793 | Pyruvate dehydrogenase E1 component alpha subunit. | 2-oxoglutarate dehydrogenase E2 component. | 0.986 |
SFS10747.1 | aceE | SAMN04487783_1455 | SAMN04487783_2813 | Pyruvate dehydrogenase E1 component alpha subunit. | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.848 |
SFS10747.1 | kgd | SAMN04487783_1455 | SAMN04487783_2135 | Pyruvate dehydrogenase E1 component alpha subunit. | 2-oxoglutarate dehydrogenase E1 component. | 0.985 |
SFS10747.1 | pdhD | SAMN04487783_1455 | SAMN04487783_2792 | Pyruvate dehydrogenase E1 component alpha subunit. | Dihydrolipoamide dehydrogenase. | 0.978 |
SFS10747.1 | sucC | SAMN04487783_1455 | SAMN04487783_0610 | Pyruvate dehydrogenase E1 component alpha subunit. | succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.746 |
SFS10753.1 | SFS10747.1 | SAMN04487783_1456 | SAMN04487783_1455 | Pyruvate dehydrogenase E1 component beta subunit. | Pyruvate dehydrogenase E1 component alpha subunit. | 0.999 |
SFS10753.1 | SFS13923.1 | SAMN04487783_1456 | SAMN04487783_1729 | Pyruvate dehydrogenase E1 component beta subunit. | Dihydrolipoamide dehydrogenase. | 0.973 |
SFS10753.1 | SFS17954.1 | SAMN04487783_1456 | SAMN04487783_2459 | Pyruvate dehydrogenase E1 component beta subunit. | Pyruvate dehydrogenase E1 component alpha subunit. | 0.999 |
SFS10753.1 | SFS18187.1 | SAMN04487783_1456 | SAMN04487783_2561 | Pyruvate dehydrogenase E1 component beta subunit. | Mercuric reductase. | 0.971 |
SFS10753.1 | SFS18998.1 | SAMN04487783_1456 | SAMN04487783_2793 | Pyruvate dehydrogenase E1 component beta subunit. | 2-oxoglutarate dehydrogenase E2 component. | 0.990 |
SFS10753.1 | aceE | SAMN04487783_1456 | SAMN04487783_2813 | Pyruvate dehydrogenase E1 component beta subunit. | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.805 |
SFS10753.1 | kgd | SAMN04487783_1456 | SAMN04487783_2135 | Pyruvate dehydrogenase E1 component beta subunit. | 2-oxoglutarate dehydrogenase E1 component. | 0.996 |
SFS10753.1 | pdhD | SAMN04487783_1456 | SAMN04487783_2792 | Pyruvate dehydrogenase E1 component beta subunit. | Dihydrolipoamide dehydrogenase. | 0.988 |
SFS10753.1 | sucC | SAMN04487783_1456 | SAMN04487783_0610 | Pyruvate dehydrogenase E1 component beta subunit. | succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.779 |
SFS13923.1 | SFS10747.1 | SAMN04487783_1729 | SAMN04487783_1455 | Dihydrolipoamide dehydrogenase. | Pyruvate dehydrogenase E1 component alpha subunit. | 0.908 |
SFS13923.1 | SFS10753.1 | SAMN04487783_1729 | SAMN04487783_1456 | Dihydrolipoamide dehydrogenase. | Pyruvate dehydrogenase E1 component beta subunit. | 0.973 |
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