STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000753865_02900Unannotated protein. (461 aa)    
Predicted Functional Partners:
GCA_000753865_01776
Unannotated protein.
 
  0.904
GCA_000753865_03608
Unannotated protein.
 
  0.898
GCA_000753865_02551
Unannotated protein.
 
 0.861
GCA_000753865_02573
Unannotated protein.
 
  0.852
GCA_000753865_00139
Unannotated protein.
 
  0.851
GCA_000753865_03366
Unannotated protein.
 
 
 0.846
GCA_000753865_00018
Unannotated protein.
 
  0.824
GCA_000753865_01555
Unannotated protein.
  
  
  0.819
GCA_000753865_02570
Unannotated protein.
 
 0.815
GCA_000753865_01027
Unannotated protein.
 
  0.814
Your Current Organism:
Alteromonas sp. LOR
NCBI taxonomy Id: 1537994
Other names: A. sp. LOR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.