STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQS16132.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)    
Predicted Functional Partners:
OQS16136.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.790
OQS13325.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.740
OQS14149.1
LytR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.654
OQS16135.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.652
OQS16133.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.649
OQS16134.1
Acetophenone carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.644
OQS15680.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
   
    0.638
OQS14656.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.616
B0T36_04880
IS5 family transposase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.576
OQS13546.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.527
Your Current Organism:
Nocardia donostiensis
NCBI taxonomy Id: 1538463
Other names: CECT 8839, DSM 46814, N. donostiensis, Nocardia sp. W9944, Nocardia sp. X1654, Nocardia sp. X1655, strain X1654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.