STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQS15248.1Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. (130 aa)    
Predicted Functional Partners:
OQS15246.1
Gas vesicle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.969
OQS15247.1
Gas vesicle protein GvpFL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.969
OQS15307.1
Gas vesicle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.969
OQS15245.1
Gas vesicle protein K; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.966
OQS15249.1
Gas vesicle protein G; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.943
OQS15250.1
Gas vesicle protein GvpFL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.939
gvpA
Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
   
 0.933
OQS15309.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.903
OQS15251.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.838
Your Current Organism:
Nocardia donostiensis
NCBI taxonomy Id: 1538463
Other names: CECT 8839, DSM 46814, N. donostiensis, Nocardia sp. W9944, Nocardia sp. X1654, Nocardia sp. X1655, strain X1654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.