STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK75627.1Hypothetical protein. (158 aa)    
Predicted Functional Partners:
AMK75625.1
Hypothetical protein.
 
    
0.806
AMK75624.1
Hypothetical protein.
       0.783
AMK75626.1
Hypothetical protein.
       0.773
AMK75628.1
Hypothetical protein.
       0.773
AMK75623.1
Hypothetical protein.
       0.588
AMK75629.1
Hypothetical protein.
       0.565
AMK75630.1
Hypothetical protein.
       0.447
AMK75631.1
Hypothetical protein.
       0.434
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.