STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK75818.1Hypothetical protein. (152 aa)    
Predicted Functional Partners:
AMK75817.1
Hypothetical protein.
 
     0.791
AMK77440.1
Selenium-binding protein.
  
    0.714
AMK78650.1
Hypothetical protein.
  
     0.708
AMK75825.1
Cytochrome C oxidase subunit I.
  
     0.683
AMK75546.1
Quinoprotein dehydrogenase-associated SoxYZ-like carrier.
 
     0.659
AMK77041.1
Hypothetical protein.
  
     0.638
AMK78523.1
ATPase.
 
     0.638
AMK78998.1
Cytochrome P460.
  
     0.636
AMK75824.1
Cytochrome C oxidase subunit II.
  
     0.635
AMK77444.1
Photosynthetic protein synthase I.
  
     0.634
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.