STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK75943.1Hypothetical protein; Belongs to the SOS response-associated peptidase family. (219 aa)    
Predicted Functional Partners:
AMK75946.1
Integrase; Belongs to the 'phage' integrase family.
  
    0.584
AMK75947.1
Integrase.
  
    0.584
AMK75945.1
Hypothetical protein.
     
 0.509
AMK75944.1
umuDC operon-like protein; Belongs to the peptidase S24 family.
     
 0.495
AMK75936.1
Hypothetical protein.
       0.449
AMK75937.1
Restriction endonuclease subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.449
AMK75938.1
Hypothetical protein.
       0.449
AMK75939.1
Nucleotidyltransferase.
       0.449
AMK75940.1
Hypothetical protein.
       0.449
AMK75941.1
Type I restriction endonuclease subunit M.
       0.449
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.