Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMK75588.1 | AMK75589.1 | JT25_003645 | JT25_003650 | NADP oxidoreductase. | NADP oxidoreductase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | 0.993 |
| AMK75588.1 | AMK76155.1 | JT25_003645 | JT25_006565 | NADP oxidoreductase. | Carbamoyltransferase; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.594 |
| AMK75588.1 | AMK76156.1 | JT25_003645 | JT25_006570 | NADP oxidoreductase. | Hydrogenase expression/formation protein HypE. | 0.590 |
| AMK75588.1 | AMK76158.1 | JT25_003645 | JT25_006580 | NADP oxidoreductase. | Hydrogenase formation protein HypD; Belongs to the HypD family. | 0.578 |
| AMK75588.1 | AMK76159.1 | JT25_003645 | JT25_006585 | NADP oxidoreductase. | Hydrogenase assembly protein HupF. | 0.565 |
| AMK75588.1 | AMK76174.1 | JT25_003645 | JT25_006660 | NADP oxidoreductase. | Hydrogenase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | 0.918 |
| AMK75589.1 | AMK75588.1 | JT25_003650 | JT25_003645 | NADP oxidoreductase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | NADP oxidoreductase. | 0.993 |
| AMK75589.1 | AMK76155.1 | JT25_003650 | JT25_006565 | NADP oxidoreductase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | Carbamoyltransferase; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.721 |
| AMK75589.1 | AMK76156.1 | JT25_003650 | JT25_006570 | NADP oxidoreductase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | Hydrogenase expression/formation protein HypE. | 0.713 |
| AMK75589.1 | AMK76158.1 | JT25_003650 | JT25_006580 | NADP oxidoreductase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | Hydrogenase formation protein HypD; Belongs to the HypD family. | 0.728 |
| AMK75589.1 | AMK76159.1 | JT25_003650 | JT25_006585 | NADP oxidoreductase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | Hydrogenase assembly protein HupF. | 0.696 |
| AMK75589.1 | AMK76160.1 | JT25_003650 | JT25_006590 | NADP oxidoreductase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | Hydrogenase nickel incorporation protein HypB. | 0.554 |
| AMK75589.1 | AMK76174.1 | JT25_003650 | JT25_006660 | NADP oxidoreductase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | Hydrogenase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | 0.413 |
| AMK75589.1 | hypA | JT25_003650 | JT25_006595 | NADP oxidoreductase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.534 |
| AMK76153.1 | AMK76155.1 | JT25_006555 | JT25_006565 | Toxin YoeB. | Carbamoyltransferase; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.584 |
| AMK76153.1 | AMK76156.1 | JT25_006555 | JT25_006570 | Toxin YoeB. | Hydrogenase expression/formation protein HypE. | 0.584 |
| AMK76155.1 | AMK75588.1 | JT25_006565 | JT25_003645 | Carbamoyltransferase; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | NADP oxidoreductase. | 0.594 |
| AMK76155.1 | AMK75589.1 | JT25_006565 | JT25_003650 | Carbamoyltransferase; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | NADP oxidoreductase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | 0.721 |
| AMK76155.1 | AMK76153.1 | JT25_006565 | JT25_006555 | Carbamoyltransferase; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | Toxin YoeB. | 0.584 |
| AMK76155.1 | AMK76156.1 | JT25_006565 | JT25_006570 | Carbamoyltransferase; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | Hydrogenase expression/formation protein HypE. | 0.996 |
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