STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK76162.1Ni,Fe-hydrogenase I large subunit. (383 aa)    
Predicted Functional Partners:
AMK76174.1
Hydrogenase; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.982
AMK76175.1
Uptake hydrogenase small subunit.
 
  
 0.977
AMK76163.1
Rubredoxin.
 
    0.953
AMK76165.1
Hydrogenase expression protein HupH.
 
    0.952
AMK75586.1
NADP oxidoreductase.
   
 
 0.919
AMK75588.1
NADP oxidoreductase.
  
 
 0.865
hypA
Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.841
AMK76164.1
Rubredoxin; Belongs to the rubredoxin family.
 
    0.838
AMK76171.1
Hydrogenase expression protein.
 
  
 0.828
AMK76172.1
Ni/Fe hydrogenase.
 
  
 0.820
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.