STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK76272.1Hypothetical protein. (413 aa)    
Predicted Functional Partners:
AMK76042.1
Hypothetical protein.
     0.906
AMK76273.1
TonB-dependent receptor.
 
     0.740
AMK76043.1
TonB-dependent receptor.
 
 
   0.688
AMK76083.1
ABC transporter permease.
  
     0.645
AMK75332.1
Cell division protein FtsK.
    
 
 0.583
AMK76082.1
Hypothetical protein.
  
     0.583
AMK78552.1
Hypothetical protein.
  
 
 
 0.551
AMK79262.1
Hypothetical protein.
  
    0.534
JT25_001840
TonB-dependent receptor; Frameshifted.
  
     0.494
AMK75336.1
Hypothetical protein.
  
 
 
 0.466
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.