STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK76448.1Hypothetical protein. (702 aa)    
Predicted Functional Partners:
AMK76455.1
Hypothetical protein.
 
     0.748
AMK78960.1
Hypothetical protein.
  
     0.666
AMK75822.1
Hypothetical protein.
  
   
 0.607
AMK79408.1
Hypothetical protein.
  
     0.586
AMK79409.1
Hypothetical protein.
  
     0.578
AMK77064.1
Poly(3-hydroxybutyrate) depolymerase.
 
 
 
 0.510
AMK76529.1
Poly(3-hydroxybutyrate) depolymerase.
 
 
 
 0.499
AMK78347.1
Hypothetical protein.
  
     0.479
AMK76513.1
Exosortase XrtM.
  
     0.472
AMK79064.1
Hypothetical protein.
  
     0.459
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.