STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK76773.1Competence protein ComFB. (91 aa)    
Predicted Functional Partners:
AMK75999.1
Hypothetical protein.
  
     0.707
AMK75121.1
Histidine kinase.
  
     0.609
AMK75120.1
Histidine kinase.
  
     0.608
AMK77340.1
Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
  
     0.607
AMK76523.1
Hypothetical protein.
  
     0.576
AMK76772.1
Hypothetical protein.
       0.576
AMK76178.1
Hypothetical protein.
  
     0.560
AMK76435.1
Signal transduction protein.
  
     0.541
AMK77970.1
Hypothetical protein.
  
     0.536
AMK75314.1
Response regulator receiver protein.
  
     0.511
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.