STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK77266.1Pilus assembly protein PilO. (208 aa)    
Predicted Functional Partners:
AMK77265.1
Pilus assembly protein PilN.
 
 
 0.997
AMK77267.1
Pilus assembly protein PilP.
 
 
 0.996
AMK77264.1
Pilus assembly protein PilM.
 
 
 0.992
AMK77268.1
Pilus assembly protein PilQ.
 
 
 0.991
AMK77995.1
Peptidoglycan-binding protein.
  
 
   0.915
AMK78858.1
Hypothetical protein.
  
 
 0.881
AMK78282.1
Hypothetical protein.
 
   
 0.835
AMK78283.1
Type IV pilus modification protein PilV.
 
   
 0.829
AMK78284.1
Hypothetical protein.
 
  
 0.819
AMK77847.1
Pilus assembly protein PilZ.
  
   
 0.801
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.