STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK77647.1Hypothetical protein. (607 aa)    
Predicted Functional Partners:
AMK77646.1
Hypothetical protein.
 
   
 0.958
AMK77645.1
Hypothetical protein.
 
   
 0.954
AMK75502.1
Hypothetical protein.
  
     0.761
AMK77217.1
Alpha-2-macroglobulin.
  
    0.756
AMK79144.1
ATP synthase.
  
     0.628
AMK78019.1
Hypothetical protein.
  
     0.609
AMK79145.1
Hypothetical protein.
  
     0.591
AMK76495.1
Alpha/beta hydrolase.
  
     0.582
AMK79142.1
Hypothetical protein.
  
     0.564
AMK76815.1
Hypothetical protein.
  
     0.538
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.