STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK77811.1Hypothetical protein. (419 aa)    
Predicted Functional Partners:
AMK77812.1
Polysaccharide biosynthesis protein.
       0.772
AMK77810.1
Capsular biosynthesis protein.
       0.766
AMK77809.1
Sugar transporter.
       0.763
AMK77808.1
Undecaprenyl-phosphate glucose phosphotransferase.
       0.736
AMK77813.1
Methyltransferase type 11.
       0.699
AMK77814.1
Glycosyl transferase family 2.
       0.699
AMK77815.1
Glycosyl transferase family 2.
       0.699
AMK77816.1
Glycosyl transferase family 1.
       0.636
AMK77817.1
Rhamnosyltransferase.
       0.636
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.