Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMK74929.1 | AMK75283.1 | JT25_000250 | JT25_002070 | Pilus assembly protein PilZ. | Pilus assembly protein PilZ; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.477 |
| AMK74929.1 | AMK76435.1 | JT25_000250 | JT25_008010 | Pilus assembly protein PilZ. | Signal transduction protein. | 0.755 |
| AMK74929.1 | AMK77309.1 | JT25_000250 | JT25_012615 | Pilus assembly protein PilZ. | Cyclic nucleotide-binding protein. | 0.761 |
| AMK74929.1 | AMK77907.1 | JT25_000250 | JT25_015715 | Pilus assembly protein PilZ. | Topoisomerase II. | 0.695 |
| AMK74929.1 | AMK77918.1 | JT25_000250 | JT25_015775 | Pilus assembly protein PilZ. | Hypothetical protein. | 0.484 |
| AMK74929.1 | AMK78859.1 | JT25_000250 | JT25_020625 | Pilus assembly protein PilZ. | Hypothetical protein. | 0.427 |
| AMK74929.1 | AMK79189.1 | JT25_000250 | JT25_022345 | Pilus assembly protein PilZ. | Hypothetical protein. | 0.686 |
| AMK75283.1 | AMK74929.1 | JT25_002070 | JT25_000250 | Pilus assembly protein PilZ; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Pilus assembly protein PilZ. | 0.477 |
| AMK75283.1 | AMK77309.1 | JT25_002070 | JT25_012615 | Pilus assembly protein PilZ; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Cyclic nucleotide-binding protein. | 0.527 |
| AMK75283.1 | AMK77907.1 | JT25_002070 | JT25_015715 | Pilus assembly protein PilZ; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Topoisomerase II. | 0.643 |
| AMK75283.1 | AMK77918.1 | JT25_002070 | JT25_015775 | Pilus assembly protein PilZ; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Hypothetical protein. | 0.406 |
| AMK75283.1 | AMK78859.1 | JT25_002070 | JT25_020625 | Pilus assembly protein PilZ; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Hypothetical protein. | 0.518 |
| AMK75283.1 | AMK79189.1 | JT25_002070 | JT25_022345 | Pilus assembly protein PilZ; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Hypothetical protein. | 0.664 |
| AMK76435.1 | AMK74929.1 | JT25_008010 | JT25_000250 | Signal transduction protein. | Pilus assembly protein PilZ. | 0.755 |
| AMK76435.1 | AMK77309.1 | JT25_008010 | JT25_012615 | Signal transduction protein. | Cyclic nucleotide-binding protein. | 0.773 |
| AMK76435.1 | AMK77907.1 | JT25_008010 | JT25_015715 | Signal transduction protein. | Topoisomerase II. | 0.652 |
| AMK76435.1 | AMK77918.1 | JT25_008010 | JT25_015775 | Signal transduction protein. | Hypothetical protein. | 0.456 |
| AMK76435.1 | AMK78846.1 | JT25_008010 | JT25_020560 | Signal transduction protein. | Hypothetical protein. | 0.414 |
| AMK76435.1 | AMK78859.1 | JT25_008010 | JT25_020625 | Signal transduction protein. | Hypothetical protein. | 0.530 |
| AMK76435.1 | AMK79189.1 | JT25_008010 | JT25_022345 | Signal transduction protein. | Hypothetical protein. | 0.489 |
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