Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMK77328.1 | AMK78121.1 | JT25_012710 | JT25_016805 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Urea ABC transporter ATP-binding subunit UrtE. | 0.582 |
| AMK78121.1 | AMK77328.1 | JT25_016805 | JT25_012710 | Urea ABC transporter ATP-binding subunit UrtE. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.582 |
| AMK78121.1 | AMK78122.1 | JT25_016805 | JT25_016810 | Urea ABC transporter ATP-binding subunit UrtE. | Urea ABC transporter ATP-binding protein UrtD. | 0.997 |
| AMK78121.1 | AMK78123.1 | JT25_016805 | JT25_016815 | Urea ABC transporter ATP-binding subunit UrtE. | Urea ABC transporter permease subunit UrtC; Belongs to the binding-protein-dependent transport system permease family. | 0.999 |
| AMK78121.1 | AMK78124.1 | JT25_016805 | JT25_016820 | Urea ABC transporter ATP-binding subunit UrtE. | Hypothetical protein. | 0.768 |
| AMK78121.1 | AMK78125.1 | JT25_016805 | JT25_016825 | Urea ABC transporter ATP-binding subunit UrtE. | Urea ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. | 0.986 |
| AMK78121.1 | AMK78126.1 | JT25_016805 | JT25_016830 | Urea ABC transporter ATP-binding subunit UrtE. | Branched-chain amino acid ABC transporter substrate-binding protein. | 0.982 |
| AMK78121.1 | AMK78725.1 | JT25_016805 | JT25_019895 | Urea ABC transporter ATP-binding subunit UrtE. | Branched-chain amino acid ABC transporter substrate-binding protein. | 0.602 |
| AMK78121.1 | ureD | JT25_016805 | JT25_016795 | Urea ABC transporter ATP-binding subunit UrtE. | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.878 |
| AMK78121.1 | ureE | JT25_016805 | JT25_016745 | Urea ABC transporter ATP-binding subunit UrtE. | Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.744 |
| AMK78121.1 | ureF | JT25_016805 | JT25_016740 | Urea ABC transporter ATP-binding subunit UrtE. | Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.725 |
| AMK78122.1 | AMK78121.1 | JT25_016810 | JT25_016805 | Urea ABC transporter ATP-binding protein UrtD. | Urea ABC transporter ATP-binding subunit UrtE. | 0.997 |
| AMK78122.1 | AMK78123.1 | JT25_016810 | JT25_016815 | Urea ABC transporter ATP-binding protein UrtD. | Urea ABC transporter permease subunit UrtC; Belongs to the binding-protein-dependent transport system permease family. | 0.999 |
| AMK78122.1 | AMK78124.1 | JT25_016810 | JT25_016820 | Urea ABC transporter ATP-binding protein UrtD. | Hypothetical protein. | 0.768 |
| AMK78122.1 | AMK78125.1 | JT25_016810 | JT25_016825 | Urea ABC transporter ATP-binding protein UrtD. | Urea ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. | 0.992 |
| AMK78122.1 | AMK78126.1 | JT25_016810 | JT25_016830 | Urea ABC transporter ATP-binding protein UrtD. | Branched-chain amino acid ABC transporter substrate-binding protein. | 0.983 |
| AMK78122.1 | ureD | JT25_016810 | JT25_016795 | Urea ABC transporter ATP-binding protein UrtD. | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.870 |
| AMK78122.1 | ureE | JT25_016810 | JT25_016745 | Urea ABC transporter ATP-binding protein UrtD. | Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.737 |
| AMK78122.1 | ureF | JT25_016810 | JT25_016740 | Urea ABC transporter ATP-binding protein UrtD. | Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.721 |
| AMK78123.1 | AMK78121.1 | JT25_016815 | JT25_016805 | Urea ABC transporter permease subunit UrtC; Belongs to the binding-protein-dependent transport system permease family. | Urea ABC transporter ATP-binding subunit UrtE. | 0.999 |
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