STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK78315.1Hypothetical protein. (228 aa)    
Predicted Functional Partners:
AMK78314.1
Tetrahydromethanopterin synthesis protein.
 
     0.957
AMK78621.1
Uridylate kinase.
   
 0.924
AMK74964.1
Dihydropteroate synthase.
 
   
 0.830
AMK78619.1
H4MPT-linked C1 transfer pathway protein.
 
   
 0.827
AMK78617.1
Histidine biosynthesis protein; Belongs to the HisA/HisF family.
 
   
 0.825
AMK78618.1
Hypothetical protein.
 
   
 0.814
AMK77484.1
Formylmethanofuran dehydrogenase subunit A.
 
   
 0.810
AMK74963.1
Flavoprotein.
 
     0.804
AMK78615.1
triphosphoribosyl-dephospho-CoA synthase.
 
     0.799
AMK77485.1
Formylmethanofuran dehydrogenase subunit B.
 
     0.797
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.