STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK78336.1Hypothetical protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (397 aa)    
Predicted Functional Partners:
AMK78337.1
Hypothetical protein.
  
 
 0.974
AMK78332.1
Hypothetical protein.
 
  
 0.968
AMK78333.1
Type II secretion system protein GspI.
 
  
 0.962
AMK78334.1
Type II secretion system protein GspJ.
 
   
 0.961
AMK78335.1
General secretion pathway protein GspK.
 
  
 0.961
AMK78327.1
Hypothetical protein.
 
   
 0.926
AMK78857.1
Hypothetical protein.
 
 
 0.921
AMK78329.1
Type II secretion system protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.911
AMK78331.1
Type II secretion system protein GspG.
 
  
 0.906
AMK78395.1
Fimbrial assembly protein.
     
 0.904
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.