STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK78533.1ABC transporter ATP-binding protein. (245 aa)    
Predicted Functional Partners:
AMK78534.1
Multidrug ABC transporter permease.
 
  
 0.969
AMK78532.1
Hypothetical protein.
 
    0.959
AMK76052.1
Hypothetical protein.
 
  
 0.927
AMK79132.1
Hypothetical protein.
 
  
 0.927
AMK76051.1
Antibiotic ABC transporter permease.
 
  
 0.917
AMK76081.1
ABC transporter ATP-binding protein.
 
    
0.916
AMK75000.1
ABC transporter.
 
     
0.888
AMK77884.1
ABC transporter ATP-binding protein.
 
0.886
AMK78725.1
Branched-chain amino acid ABC transporter substrate-binding protein.
 
  
 0.830
AMK78832.1
ABC transporter ATP-binding protein.
 
0.829
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.