STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK78560.1Hypothetical protein. (165 aa)    
Predicted Functional Partners:
AMK78562.1
Ferredoxin.
 
     0.717
AMK78559.1
Hypothetical protein.
       0.636
AMK78056.1
phenylacetate--CoA ligase.
  
     0.632
nifH
Nitrogenase reductase; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
  
  
 0.607
AMK77812.1
Polysaccharide biosynthesis protein.
  
     0.591
AMK79260.1
Hypothetical protein.
  
     0.544
AMK77064.1
Poly(3-hydroxybutyrate) depolymerase.
  
     0.539
AMK76560.1
Anti-sigma B factor antagonist.
   
  
 0.532
AMK78291.1
Hypothetical protein.
   
  
 0.532
AMK78296.1
Anti-anti-sigma factor.
   
  
 0.532
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.