STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK79153.1Hypothetical protein. (198 aa)    
Predicted Functional Partners:
AMK79152.1
Hypothetical protein.
 
     0.914
AMK75817.1
Hypothetical protein.
 
   
 0.804
AMK78935.1
MxaL protein.
   
 0.797
AMK78926.1
Methanol oxidation system protein MoxJ.
  
     0.774
AMK78925.1
Methanol dehydrogenase.
  
     0.772
AMK78928.1
Methanol dehydrogenase; Catalyzes the oxidation of primary alcohols including methanol.
 
     0.771
AMK77640.1
ABC transporter substrate-binding protein.
  
     0.770
AMK77641.1
Methanol dehydrogenase.
  
     0.766
AMK78927.1
Cytochrome C.
  
     0.752
AMK78934.1
MxaK protein.
 
     0.747
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.