STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK79302.1HAD family hydrolase. (901 aa)    
Predicted Functional Partners:
AMK79303.1
Phosphohydrolase.
       0.773
AMK78735.1
Sulfite reductase subunit alpha.
    
 0.691
AMK78391.1
Magnesium transporter MgtC.
  
 
 0.565
AMK79301.1
Hypothetical protein.
       0.558
AMK77079.1
Hypothetical protein.
   
    0.438
AMK79304.1
Hypothetical protein.
       0.427
AMK76565.1
Hypothetical protein; Belongs to the UPF0276 family.
   
    0.422
AMK77077.1
Hypothetical protein; Belongs to the UPF0276 family.
   
    0.422
AMK76480.1
Hypothetical protein.
  
    0.411
AMK79300.1
Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.404
Your Current Organism:
Methylomonas denitrificans
NCBI taxonomy Id: 1538553
Other names: M. denitrificans, Methylomonas sp. FJG1, strain FJG1
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